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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804569.1_cds_XP_016489393.1_7973
CDS Infomation

[gene=LOC107809292] [db_xref=GeneID:107809292] [protein=tetratricopeptide repeat protein 38-like isoform X2] [protein_id=XP_016489393.1] [location=complement(join(76692..76697,78350..78414,78541..78625,78719..78808,79110..79161,79246..79352,79657..79761,79840..79969,80044..80138,80306..80449,80611..80712,81215..81313,81424..81576,81709..81798))] [gbkey=CDS]
Sequence

ATGGAAGGATTAAAAGTAGATAAATGGGGTTATGAAGTAAAGACCAATTCTGATTCTTGC
ATATCTTCCATTAATTCTTATTATCATCAGGTACTTAGTTATGGAAGAGAGAGGTCAGTA
ATATTAGAAGCACCAAAACAAGACCCAAATTGTGTTTTGGCTAATATTTTAGCTGCTCAT
TATCTTTCCTCTGCTGATTCTTCACGTGCTATGCCTCTTCTTGAAGCTGCTAAGTCTTAT
CTTGAACAAGCTAGCTTGTATGAGAAGGTAGTTTTTGATGCAATCAATTGTTTGATTTCA
CCAAATAGAGATGATGATGTTGCTGTTGAACTACACTTTAAGCTGCTTAAGGATTTCCCA
AGAGATCTGGTCTCTCTTAAAAGGGCTCAAGTGCTTTGTTTCTACATGGGTTGCCCTGAT
TTGTCTCTGAAACTTGTTGAGCAGGTCCTATCAGTAAATAAACAAGAAAGTTACATTTAT
GGCATGCTCGCTTTTTCCCTATTAGAACTTGGTCGATACACAGATGCAGAAGAAGCTGCA
AACAAAGGCTTTGAGATTGATAGTGAAGATGCCTGGACACATCATGCTCTCTGTCATGTT
TATCAGTACAAGTGTCGTTTTAAAGAAGCAGTACAATTTATGGAGAAGTGCTCAAGAACC
TGGAGTTCTTTGTCATCTTTTATGTATACACACAATTGGTGGCACGTCGCACTTTGTTAT
TTGGAAGGTCATTCTCCCATGGAAAAAGTAAGAGATGTGTATGACCAGAACATCTGGAAA
GAGTTGGAAAGAAGTGATGCCTCTCCAGCTGAAGTGTACTTGAATGCTGTTGGTTTGCTA
CTCCGGGTATATGTACGAGGTGGGATTAATGTCTTTGGGGATCGTTTGAAGATCCTAGCT
GATTGTCTCACAAATAAAGCTTTCTGGCATCTTGAATGGCACCTGGATGTATTGGTGGTG
TGGGCCCTATCTTGTACAGGCGAAGTTTCTAAAGCGGAAGAGTTACTCGAGGGTTTGAAA
TCCAGAATTTCCAACATGACCAAGAAAAAACAACAACATATGCAGCGAGCAATGCTGCTT
GCAGAAGCTCTATTTGAATATGGCAAGGGTGAAAATGAACGCGCGTTAGAATTTCTTGAC
GAGACATTTGATGCTATTAACTACAAGATTATTGGAGCATCAGACGAACAGCTTGATGTT
TTCAATGAAGTTTGGATCACTATGTTGTTAAACAGTGGTCAAGCTACAAAAGCTATTCAG
GCGATAGAGAAGCAGCTAAAGAAGAGGGAAGGAACCCCGTTCTTATGGCGCCTCCTGGGG
TGA

Peptide Sequence

PEP ID

XP_016489393.1
PEP Infomation

PREDICTED: tetratricopeptide repeat protein 38-like isoform X2 [Nicotiana tabacum]
Sequence

MEGLKVDKWGYEVKTNSDSCISSINSYYHQVLSYGRERSVILEAPKQDPNCVLANILAAH
YLSSADSSRAMPLLEAAKSYLEQASLYEKVVFDAINCLISPNRDDDVAVELHFKLLKDFP
RDLVSLKRAQVLCFYMGCPDLSLKLVEQVLSVNKQESYIYGMLAFSLLELGRYTDAEEAA
NKGFEIDSEDAWTHHALCHVYQYKCRFKEAVQFMEKCSRTWSSLSSFMYTHNWWHVALCY
LEGHSPMEKVRDVYDQNIWKELERSDASPAEVYLNAVGLLLRVYVRGGINVFGDRLKILA
DCLTNKAFWHLEWHLDVLVVWALSCTGEVSKAEELLEGLKSRISNMTKKKQQHMQRAMLL
AEALFEYGKGENERALEFLDETFDAINYKIIGASDEQLDVFNEVWITMLLNSGQATKAIQ
AIEKQLKKREGTPFLWRLLG

Transcript Sequence

Gene sequence data has not been registered.